Gm42862 Gene Detail

Summary

• Symbol
  Gm42862
• Name
  predicted gene 42862

• Feature Type
  unclassified gene
• IDs
  MGI:5662999
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:60154284-60156904 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  238 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662999	unclassified gene	Chr5:60154284-60156904 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001557	unclassified gene	Chr5:59419319-59421939 (-)
A/J	MGP_AJ_G0001538	unclassified gene	Chr5:57165336-57167961 (-)
AKR/J	MGP_AKRJ_G0001523	unclassified gene	Chr5:59002374-59005003 (-)
BALB/cJ	MGP_BALBcJ_G0001534	unclassified gene	Chr5:57814599-57817224 (-)
C3H/HeJ	MGP_C3HHeJ_G0001511	unclassified gene	Chr5:59323787-59326412 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001652	unclassified gene	Chr5:61870535-61873155 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0001486	unclassified gene	Chr5:58351551-58354154 (-)
CBA/J	MGP_CBAJ_G0001502	unclassified gene	Chr5:63825467-63828092 (-)
DBA/2J	MGP_DBA2J_G0001507	unclassified gene	Chr5:57229514-57232053 (-)
FVB/NJ	MGP_FVBNJ_G0001514	unclassified gene	Chr5:56473165-56476056 (-)
LP/J	MGP_LPJ_G0001561	unclassified gene	Chr5:59847793-59854348 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0001640	unclassified gene	Chr5:58693209-58695829 (-)
PWK/PhJ	MGP_PWKPhJ_G0001443	unclassified gene	Chr5:56236845-56241435 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001412	unclassified gene	Chr5:58032121-58034736 (-)
WSB/EiJ	MGP_WSBEiJ_G0001503	unclassified gene	Chr5:58846003-58848605 (-)

Homology

• Gene Tree
  Gm42862
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000105158 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105158	Ensembl Gene Model | MGI Sequence Detail	2621	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;