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Gm42947 Gene Detail
Summary
  • Symbol
    Gm42947
  • Name
    predicted gene 42947
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5663084
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:155745739-155751493 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    326 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5663084
 lncRNA gene Chr3:155745739-155751493 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006373
 lincRNA gene Chr3:160114438-160120110 (-)
A/J MGP_AJ_G0006366
 lincRNA gene Chr3:154287781-154293436 (-)
AKR/J MGP_AKRJ_G0006341
 lincRNA gene Chr3:158376044-158381698 (-)
BALB/cJ MGP_BALBcJ_G0006340
 lincRNA gene Chr3:154088425-154094115 (-)
C3H/HeJ MGP_C3HHeJ_G0006291
 lincRNA gene Chr3:158765003-158771136 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006505
 lincRNA gene Chr3:165330088-165335775 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005799
 lincRNA gene Chr3:148951890-148957489 (-)
CAST/EiJ MGP_CASTEiJ_G0006225
 lincRNA gene Chr3:158910606-158911837 (-)
CBA/J MGP_CBAJ_G0006274
 lincRNA gene Chr3:171266041-171272101 (-)
DBA/2J MGP_DBA2J_G0006295
 lincRNA gene Chr3:153329574-153335856 (-)
FVB/NJ MGP_FVBNJ_G0006317
 lincRNA gene Chr3:150685112-150690785 (-)
LP/J MGP_LPJ_G0006377
 lincRNA gene Chr3:161429112-161434790 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006307
 lincRNA gene Chr3:179790356-179797015 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006511
 lincRNA gene Chr3:158033668-158039380 (-)
PWK/PhJ MGP_PWKPhJ_G0006162
 lincRNA gene Chr3:153281159-153287270 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006075
 lincRNA gene Chr3:156219898-156226757 (-)
WSB/EiJ MGP_WSBEiJ_G0006271
 lincRNA gene Chr3:159038998-159045542 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000104826 Ensembl Gene Model | MGI Sequence Detail 5755 C57BL/6J ±  kb
transcript ENSMUST00000198230 Ensembl | MGI Sequence Detail 675 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/03/2024
MGI 6.24 		The Jackson Laboratory