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Gm42999 Pseudogene Detail
Summary
  • Symbol
    Gm42999
  • Name
    predicted gene 42999
  • Feature Type
    pseudogene
  • IDs
    MGI:5663136
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:58518976-58520854 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    6 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5663136
 pseudogene Chr5:58518976-58520854 (+)
129S1/SvImJ MGP_129S1SvImJ_G0040391
 pseudogene Chr5:57696447-57697626 (+)
A/J MGP_AJ_G0040372
 pseudogene Chr5:55554567-55557074 (+)
AKR/J MGP_AKRJ_G0040304
 pseudogene Chr5:57352546-57354210 (+)
BALB/cJ MGP_BALBcJ_G0040379
 pseudogene Chr5:56160915-56162183 (+)
C3H/HeJ MGP_C3HHeJ_G0039997
 pseudogene Chr5:57646882-57648588 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040987
 pseudogene Chr5:60005975-60006934 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0039067
 pseudogene Chr5:56659714-56660686 (+)
CBA/J MGP_CBAJ_G0039963
 pseudogene Chr5:62008106-62009513 (+)
DBA/2J MGP_DBA2J_G0040172
 pseudogene Chr5:55615663-55617422 (+)
FVB/NJ MGP_FVBNJ_G0040121
 pseudogene Chr5:54880158-54881128 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0040114
 pseudogene Chr5:63919899-63922523 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0041067
 pseudogene Chr5:56970370-56972087 (+)
PWK/PhJ MGP_PWKPhJ_G0038752
 pseudogene Chr5:54662928-54664186 (+)
SPRET/EiJ MGP_SPRETEiJ_G0038459
 pseudogene Chr5:56390374-56392234 (+)
WSB/EiJ MGP_WSBEiJ_G0039309
 pseudogene Chr5:57135299-57136815 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    18
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105269 Ensembl Gene Model | MGI Sequence Detail 1879 C57BL/6J ±  kb
transcript ENSMUST00000198049 Ensembl | MGI Sequence Detail 786 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 4
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory