Gm43002 Gene Detail

Summary

• Symbol
  Gm43002
• Name
  predicted gene 43002

• Feature Type
  unclassified gene
• IDs
  MGI:5663139
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:57775186-57775340 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663139	unclassified gene	Chr5:57775186-57775340 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001541	unclassified gene	Chr5:56903022-56903176 (+)
A/J	MGP_AJ_G0001522	unclassified gene	Chr5:54825190-54825344 (+)
AKR/J	MGP_AKRJ_G0001508	unclassified gene	Chr5:56603502-56603656 (+)
BALB/cJ	MGP_BALBcJ_G0001518	unclassified gene	Chr5:55405434-55405588 (+)
C3H/HeJ	MGP_C3HHeJ_G0001495	unclassified gene	Chr5:56897466-56897620 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001636	unclassified gene	Chr5:59189037-59189191 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0001486	unclassified gene	Chr5:61172910-61173064 (+)
DBA/2J	MGP_DBA2J_G0001491	unclassified gene	Chr5:54864235-54864389 (+)
FVB/NJ	MGP_FVBNJ_G0001498	unclassified gene	Chr5:54130514-54130668 (+)
LP/J	MGP_LPJ_G0001546	unclassified gene	Chr5:57292472-57292626 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001484	unclassified gene	Chr5:62900594-62900748 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001624	unclassified gene	Chr5:56200861-56201015 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0001487	unclassified gene	Chr5:56354113-56354267 (+)

Homology

• Gene Tree
  Gm43002
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000104924 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104924	Ensembl Gene Model | MGI Sequence Detail	155	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;