Gm43026 Pseudogene Detail

Summary

• Symbol
  Gm43026
• Name
  predicted gene 43026

• Feature Type
  pseudogene
• IDs
  MGI:5663163
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:68434815-68435139 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663163	pseudogene	Chr5:68434815-68435139 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013126	pseudogene	Chr5:68078872-68079196 (+)
A/J	MGP_AJ_G0013109	pseudogene	Chr5:65531919-65532243 (+)
AKR/J	MGP_AKRJ_G0013075	pseudogene	Chr5:67620547-67620871 (+)
BALB/cJ	MGP_BALBcJ_G0013090	pseudogene	Chr5:66189167-66189491 (+)
C3H/HeJ	MGP_C3HHeJ_G0012936	pseudogene	Chr5:67950957-67951281 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013450	pseudogene	Chr5:70901218-70901542 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012671	pseudogene	Chr5:67123656-67123978 (+)
CBA/J	MGP_CBAJ_G0012908	pseudogene	Chr5:73135162-73135486 (+)
DBA/2J	MGP_DBA2J_G0012987	pseudogene	Chr5:65534452-65534776 (+)
FVB/NJ	MGP_FVBNJ_G0012990	pseudogene	Chr5:64792676-64793000 (+)
LP/J	MGP_LPJ_G0013061	pseudogene	Chr5:68542295-68542619 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013008	pseudogene	Chr5:75946503-75946827 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013452	pseudogene	Chr5:67264059-67264383 (+)
PWK/PhJ	MGP_PWKPhJ_G0012491	pseudogene	Chr5:64571458-64571782 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012290	pseudogene	Chr5:66620036-66620359 (+)
WSB/EiJ	MGP_WSBEiJ_G0012708	pseudogene	Chr5:67508967-67509291 (+)

Homology

• Gene Tree
  Gm43026
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm43026
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000107289 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107289	Ensembl Gene Model | MGI Sequence Detail	325	C57BL/6J
transcript	ENSMUST00000202972	Ensembl | MGI Sequence Detail	325	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17