Gm43038 Pseudogene Detail

Summary

• Symbol
  Gm43038
• Name
  predicted gene 43038

• Feature Type
  pseudogene
• IDs
  MGI:5663175
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:151591514-151591601 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  56 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663175	pseudogene	Chr5:151591514-151591601 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040424	pseudogene	Chr5:157642683-157642770 (-)
A/J	MGP_AJ_G0040404	pseudogene	Chr5:150896844-150896931 (-)
AKR/J	MGP_AKRJ_G0040333	pseudogene	Chr5:155539901-155539988 (-)
BALB/cJ	MGP_BALBcJ_G0040410	pseudogene	Chr5:152154272-152154359 (-)
C3H/HeJ	MGP_C3HHeJ_G0040032	pseudogene	Chr5:156561197-156561284 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0041023	pseudogene	Chr5:163358669-163358756 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037374	pseudogene	Chr5:145221060-145221147 (-)
CAST/EiJ	MGP_CASTEiJ_G0039092	pseudogene	Chr5:156225106-156225193 (-)
CBA/J	MGP_CBAJ_G0039997	pseudogene	Chr5:170247711-170247798 (-)
DBA/2J	MGP_DBA2J_G0040204	pseudogene	Chr5:150530908-150530995 (-)
FVB/NJ	MGP_FVBNJ_G0040152	pseudogene	Chr5:149776571-149776658 (-)
LP/J	MGP_LPJ_G0040244	pseudogene	Chr5:158258686-158258773 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040143	pseudogene	Chr5:172311448-172311535 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041100	pseudogene	Chr5:155511594-155511681 (-)
PWK/PhJ	MGP_PWKPhJ_G0038778	pseudogene	Chr5:149671850-149671937 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038487	pseudogene	Chr5:152751001-152751088 (-)
WSB/EiJ	MGP_WSBEiJ_G0039339	pseudogene	Chr5:156327184-156327271 (-)

Homology

• Gene Tree
  Gm43038
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107326 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107326	Ensembl Gene Model | MGI Sequence Detail	88	C57BL/6J
transcript	ENSMUST00000202359	Ensembl | MGI Sequence Detail	88	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;