Gm43044 Pseudogene Detail

Summary

• Symbol
  Gm43044
• Name
  predicted gene 43044

• Feature Type
  pseudogene
• IDs
  MGI:5663181
  NCBI Gene: 108169108
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:59669308-59669686 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663181	pseudogene	Chr5:59669308-59669686 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013099	pseudogene	Chr5:58891606-58891984 (+)
A/J	MGP_AJ_G0013086	pseudogene	Chr5:56689661-56690039 (+)
AKR/J	MGP_AKRJ_G0013051	pseudogene	Chr5:58503682-58504060 (+)
BALB/cJ	MGP_BALBcJ_G0013063	pseudogene	Chr5:57315686-57316064 (+)
C3H/HeJ	MGP_C3HHeJ_G0012915	pseudogene	Chr5:58841854-58842232 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013424	pseudogene	Chr5:61315255-61315633 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012646	pseudogene	Chr5:57819743-57820122 (+)
CBA/J	MGP_CBAJ_G0012882	pseudogene	Chr5:63268326-63268704 (+)
DBA/2J	MGP_DBA2J_G0012960	pseudogene	Chr5:56737496-56737874 (+)
FVB/NJ	MGP_FVBNJ_G0012967	pseudogene	Chr5:55987124-55987502 (+)
LP/J	MGP_LPJ_G0013034	pseudogene	Chr5:59325849-59326227 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012981	pseudogene	Chr5:65406787-65407165 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013426	pseudogene	Chr5:58193966-58194344 (+)
PWK/PhJ	MGP_PWKPhJ_G0012464	pseudogene	Chr5:55746041-55746420 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0012682	pseudogene	Chr5:58345349-58345727 (+)

Homology

• Gene Tree
  Gm43044
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm43044
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000105038 (Evidence)
• NCBI Gene
  108169108

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105038	Ensembl Gene Model | MGI Sequence Detail	379	C57BL/6J
transcript	ENSMUST00000198091	Ensembl | MGI Sequence Detail	379	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17