Gm43125 Pseudogene Detail

Summary

• Symbol
  Gm43125
• Name
  predicted gene 43125

• Feature Type
  pseudogene
• IDs
  MGI:5663262
  NCBI Gene: 115490337
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:126961559-126962288 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663262	pseudogene	Chr6:126961559-126962288 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013704	pseudogene	Chr6:130464949-130465678 (-)
A/J	MGP_AJ_G0013690	pseudogene	Chr6:125508765-125509495 (-)
AKR/J	MGP_AKRJ_G0013652	pseudogene	Chr6:128898929-128899659 (-)
BALB/cJ	MGP_BALBcJ_G0013669	pseudogene	Chr6:125069170-125069898 (-)
C3H/HeJ	MGP_C3HHeJ_G0013513	pseudogene	Chr6:129021683-129022413 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014055	pseudogene	Chr6:133868560-133869289 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012040	pseudogene	Chr6:122680072-122680787 (-)
CAST/EiJ	MGP_CASTEiJ_G0013201	pseudogene	Chr6:129214053-129216836 (-)
CBA/J	MGP_CBAJ_G0013484	pseudogene	Chr6:139005668-139006398 (-)
DBA/2J	MGP_DBA2J_G0013564	pseudogene	Chr6:124393015-124393745 (-)
FVB/NJ	MGP_FVBNJ_G0013563	pseudogene	Chr6:123321631-123322356 (-)
LP/J	MGP_LPJ_G0013645	pseudogene	Chr6:130575226-130575973 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013577	pseudogene	Chr6:142975207-142975936 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014050	pseudogene	Chr6:128854350-128855080 (-)
PWK/PhJ	MGP_PWKPhJ_G0013007	pseudogene	Chr6:122660195-122660924 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012787	pseudogene	Chr6:126921061-126921750 (-)
WSB/EiJ	MGP_WSBEiJ_G0013256	pseudogene	Chr6:129213356-129214150 (-)

Homology

• Gene Tree
  Gm43125
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000106898 (Evidence)
• NCBI Gene
  115490337

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106898	Ensembl Gene Model | MGI Sequence Detail	730	C57BL/6J
transcript	ENSMUST00000201724	Ensembl | MGI Sequence Detail	730	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;