Gm43212 Pseudogene Detail

Summary

• Symbol
  Gm43212
• Name
  predicted gene 43212

• Feature Type
  pseudogene
• IDs
  MGI:5663349
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:106280522-106281623 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663349	pseudogene	Chr3:106280522-106281623 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040335	pseudogene	Chr3:107844103-107845204 (+)
A/J	MGP_AJ_G0040308	pseudogene	Chr3:104397166-104398267 (+)
AKR/J	MGP_AKRJ_G0040245	pseudogene	Chr3:106964031-106965132 (+)
BALB/cJ	MGP_BALBcJ_G0040308	pseudogene	Chr3:104092129-104093230 (+)
C3H/HeJ	MGP_C3HHeJ_G0039937	pseudogene	Chr3:107299004-107300105 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040909	pseudogene	Chr3:111844571-111845672 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039018	pseudogene	Chr3:106426891-106427997 (-)
CBA/J	MGP_CBAJ_G0039901	pseudogene	Chr3:115634294-115635395 (+)
DBA/2J	MGP_DBA2J_G0040109	pseudogene	Chr3:103606316-103607417 (+)
FVB/NJ	MGP_FVBNJ_G0040065	pseudogene	Chr3:101530889-101531990 (+)
LP/J	MGP_LPJ_G0040156	pseudogene	Chr3:109217102-109218203 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040061	pseudogene	Chr3:121709846-121710947 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041006	pseudogene	Chr3:106536734-106537835 (+)
PWK/PhJ	MGP_PWKPhJ_G0038709	pseudogene	Chr3:103345247-103346348 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038413	pseudogene	Chr3:104524525-104525626 (+)
WSB/EiJ	MGP_WSBEiJ_G0039256	pseudogene	Chr3:107098995-107100096 (+)

Homology

• Gene Tree
  Gm43212
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm43212
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105436 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105436	Ensembl Gene Model | MGI Sequence Detail	1102	C57BL/6J
transcript	ENSMUST00000198208	Ensembl | MGI Sequence Detail	394	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426