Gm43250 Pseudogene Detail

Summary

• Symbol
  Gm43250
• Name
  predicted gene 43250

• Feature Type
  pseudogene
• IDs
  MGI:5663387
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:52658013-52658285 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663387	pseudogene	Chr14:52658013-52658285 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011107	pseudogene	Chr14:46487233-46487517 (+)
A/J	MGP_AJ_G0011104	pseudogene	Chr14:45242666-45242950 (+)
AKR/J	MGP_AKRJ_G0011061	pseudogene	Chr14:46879776-46880060 (+)
BALB/cJ	MGP_BALBcJ_G0011077	pseudogene	Chr14:45355556-45355840 (+)
C3H/HeJ	MGP_C3HHeJ_G0010979	pseudogene	Chr14:46677762-46678046 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011365	pseudogene	Chr14:48530306-48530578 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012160	pseudogene	Chr7:45127489-45127761 (+)
CAST/EiJ	MGP_CASTEiJ_G0010792	pseudogene	Chr14:43660461-43660733 (+)
CBA/J	MGP_CBAJ_G0010951	pseudogene	Chr14:49987979-49988263 (+)
DBA/2J	MGP_DBA2J_G0010999	pseudogene	Chr14:45024853-45025136 (+)
FVB/NJ	MGP_FVBNJ_G0011005	pseudogene	Chr14:44599912-44600196 (+)
LP/J	MGP_LPJ_G0011085	pseudogene	Chr14:47064137-47064421 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010995	pseudogene	Chr14:49421681-49421965 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011345	pseudogene	Chr14:46255723-46256007 (+)
PWK/PhJ	MGP_PWKPhJ_G0010662	pseudogene	Chr14:41776726-41777010 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010486	pseudogene	Chr14:42310710-42310982 (+)
WSB/EiJ	MGP_WSBEiJ_G0010844	pseudogene	Chr14:46590389-46590672 (+)

Homology

• Gene Tree
  Gm43250
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm43250
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000105132 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105132	Ensembl Gene Model | MGI Sequence Detail	273	C57BL/6J
transcript	ENSMUST00000196536	Ensembl | MGI Sequence Detail	273	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;