Gm43255 Gene Detail

Summary

• Symbol
  Gm43255
• Name
  predicted gene 43255

• Feature Type
  lncRNA gene
• IDs
  MGI:5663392
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:36257438-36259772 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  194 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663392	lncRNA gene	Chr3:36257438-36259772 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003735	antisense lncRNA gene	Chr3:33976619-33978930 (+)
A/J	MGP_AJ_G0003716	antisense lncRNA gene	Chr3:33346594-33348928 (+)
AKR/J	MGP_AKRJ_G0003693	antisense lncRNA gene	Chr3:33947799-33950110 (+)
BALB/cJ	MGP_BALBcJ_G0003705	antisense lncRNA gene	Chr3:33111279-33113613 (+)
C3H/HeJ	MGP_C3HHeJ_G0003652	antisense lncRNA gene	Chr3:34016521-34018855 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003845	antisense lncRNA gene	Chr3:35627759-35630093 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003350	antisense lncRNA gene	Chr3:31056395-31059571 (+)
CAST/EiJ	MGP_CASTEiJ_G0003615	antisense lncRNA gene	Chr3:33866780-33869225 (+)
CBA/J	MGP_CBAJ_G0003648	antisense lncRNA gene	Chr3:36577818-36580152 (+)
DBA/2J	MGP_DBA2J_G0003657	antisense lncRNA gene	Chr3:32808265-32810599 (+)
FVB/NJ	MGP_FVBNJ_G0003678	antisense lncRNA gene	Chr3:32262209-32264541 (+)
LP/J	MGP_LPJ_G0003736	antisense lncRNA gene	Chr3:34756911-34759222 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003666	antisense lncRNA gene	Chr3:39009530-39011864 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003846	antisense lncRNA gene	Chr3:33804516-33806827 (+)
PWK/PhJ	MGP_PWKPhJ_G0003571	antisense lncRNA gene	Chr3:32456342-32458674 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003514	antisense lncRNA gene	Chr3:33179841-33182306 (+)
WSB/EiJ	MGP_WSBEiJ_G0003651	antisense lncRNA gene	Chr3:33822191-33824525 (+)

Homology

• Gene Tree
  Gm43255
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000104568 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104568	Ensembl Gene Model | MGI Sequence Detail	2335	C57BL/6J
transcript	ENSMUST00000198885	Ensembl | MGI Sequence Detail	1437	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;