Gm43304 Pseudogene Detail

Summary

• Symbol
  Gm43304
• Name
  predicted gene 43304

• Feature Type
  pseudogene
• IDs
  MGI:5663441
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:54561455-54561780 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663441	pseudogene	Chr14:54561455-54561780 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011111	pseudogene	Chr14:48262258-48263923 (-)
A/J	MGP_AJ_G0011111	pseudogene	Chr14:47333039-47333364 (-)
AKR/J	MGP_AKRJ_G0011070	pseudogene	Chr14:49045188-49045513 (-)
BALB/cJ	MGP_BALBcJ_G0011080	pseudogene	Chr14:47303392-47303717 (-)
C3H/HeJ	MGP_C3HHeJ_G0010982	pseudogene	Chr14:48727131-48727456 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011373	pseudogene	Chr14:50714365-50714690 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009947	pseudogene	Chr14:45749161-45751117 (-)
CAST/EiJ	MGP_CASTEiJ_G0010797	pseudogene	Chr14:44961543-44961868 (-)
CBA/J	MGP_CBAJ_G0010958	pseudogene	Chr14:52215125-52215450 (-)
DBA/2J	MGP_DBA2J_G0011006	pseudogene	Chr14:47078667-47078992 (-)
FVB/NJ	MGP_FVBNJ_G0011009	pseudogene	Chr14:46530754-46531079 (-)
LP/J	MGP_LPJ_G0011092	pseudogene	Chr14:49277547-49277872 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011000	pseudogene	Chr14:51652143-51652468 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011349	pseudogene	Chr14:48228918-48229243 (-)
PWK/PhJ	MGP_PWKPhJ_G0010666	pseudogene	Chr14:43602567-43603232 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010490	pseudogene	Chr14:44215719-44217853 (-)
WSB/EiJ	MGP_WSBEiJ_G0010847	pseudogene	Chr14:48522648-48522973 (-)

Homology

• Gene Tree
  Gm43304
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm43304
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000105294 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105294	Ensembl Gene Model | MGI Sequence Detail	326	C57BL/6J
transcript	ENSMUST00000196803	Ensembl | MGI Sequence Detail	326	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;