Gm43338 Gene Detail

Summary

• Symbol
  Gm43338
• Name
  predicted gene 43338

• Feature Type
  unclassified gene
• IDs
  MGI:5663475
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:140307377-140309599 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  211 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663475	unclassified gene	Chr5:140307377-140309599 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001826	unclassified gene	Chr5:145381572-145383781 (-)
A/J	MGP_AJ_G0001803	unclassified gene	Chr5:139197594-139199803 (-)
AKR/J	MGP_AKRJ_G0001790	unclassified gene	Chr5:143544445-143546654 (-)
BALB/cJ	MGP_BALBcJ_G0001800	unclassified gene	Chr5:140442499-140444708 (-)
C3H/HeJ	MGP_C3HHeJ_G0001777	unclassified gene	Chr5:144321066-144323275 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001921	unclassified gene	Chr5:150768783-150771007 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001583	unclassified gene	Chr5:133043665-133045858 (-)
CAST/EiJ	MGP_CASTEiJ_G0001747	unclassified gene	Chr5:143754862-143757296 (-)
CBA/J	MGP_CBAJ_G0001770	unclassified gene	Chr5:156956788-156958997 (-)
DBA/2J	MGP_DBA2J_G0001774	unclassified gene	Chr5:139009913-139012122 (-)
FVB/NJ	MGP_FVBNJ_G0001782	unclassified gene	Chr5:138152559-138154768 (-)
LP/J	MGP_LPJ_G0001829	unclassified gene	Chr5:145995360-145997569 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001763	unclassified gene	Chr5:159550853-159554586 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001910	unclassified gene	Chr5:143376476-143378685 (-)
PWK/PhJ	MGP_PWKPhJ_G0001708	unclassified gene	Chr5:138030961-138033286 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001674	unclassified gene	Chr5:141072022-141074475 (-)
WSB/EiJ	MGP_WSBEiJ_G0001770	unclassified gene	Chr5:144160172-144162394 (-)

Homology

• Gene Tree
  Gm43338
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  3
• Gene trapped
  3
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105679 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105679	Ensembl Gene Model | MGI Sequence Detail	2223	C57BL/6J

References

• Summaries
  All 3

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;