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Gm43391 Gene Detail
Summary
  • Symbol
    Gm43391
  • Name
    predicted gene 43391
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5663528
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:15669169-15683874 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    6
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5663528
 lncRNA gene Chr5:15669169-15683874 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002843
 antisense lncRNA gene Chr10:19864094-19868518 (+)
A/J MGP_AJ_G0002820
 antisense lncRNA gene Chr10:19110598-19116174 (+)
AKR/J MGP_AKRJ_G0003995
 antisense lncRNA gene Chr5:14919434-14922199 (-)
BALB/cJ MGP_BALBcJ_G0002807
 antisense lncRNA gene Chr10:19172452-19176574 (+)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0004146
 antisense lncRNA gene Chr5:14538710-14542605 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    10
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106004 Ensembl Gene Model | MGI Sequence Detail 14706 C57BL/6J ±  kb
transcript ENSMUST00000198110 Ensembl | MGI Sequence Detail 1001 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory