Gm43415 Gene Detail

Summary

• Symbol
  Gm43415
• Name
  predicted gene 43415

• Feature Type
  unclassified gene
• IDs
  MGI:5663552
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:74220699-74221448 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663552	unclassified gene	Chr5:74220699-74221448 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001627	unclassified gene	Chr5:74106683-74107432 (+)
A/J	MGP_AJ_G0001608	unclassified gene	Chr5:71316588-71317337 (+)
AKR/J	MGP_AKRJ_G0001593	unclassified gene	Chr5:73639478-73640227 (+)
BALB/cJ	MGP_BALBcJ_G0001604	unclassified gene	Chr5:72025656-72026405 (+)
C3H/HeJ	MGP_C3HHeJ_G0001581	unclassified gene	Chr5:74024580-74025326 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001721	unclassified gene	Chr5:77126143-77126892 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001402	unclassified gene	Chr5:66981402-66982150 (+)
CAST/EiJ	MGP_CASTEiJ_G0001554	unclassified gene	Chr5:73101431-73102177 (+)
CBA/J	MGP_CBAJ_G0001572	unclassified gene	Chr5:79661567-79662313 (+)
DBA/2J	MGP_DBA2J_G0001575	unclassified gene	Chr5:71386309-71387055 (+)
FVB/NJ	MGP_FVBNJ_G0001584	unclassified gene	Chr5:70535779-70536528 (+)
LP/J	MGP_LPJ_G0001631	unclassified gene	Chr5:74547005-74547754 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001566	unclassified gene	Chr5:82938654-82939403 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001711	unclassified gene	Chr5:73172878-73173627 (+)
PWK/PhJ	MGP_PWKPhJ_G0001512	unclassified gene	Chr5:70361552-70362299 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001479	unclassified gene	Chr5:72523509-72524258 (+)
WSB/EiJ	MGP_WSBEiJ_G0001572	unclassified gene	Chr5:73468149-73468898 (+)

Homology

• Gene Tree
  Gm43415
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000106973 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106973	Ensembl Gene Model | MGI Sequence Detail	750	C57BL/6J

References

• Summaries
  All 3

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;