Gm43433 Pseudogene Detail

Summary

• Symbol
  Gm43433
• Name
  predicted gene 43433

• Feature Type
  pseudogene
• IDs
  MGI:5663570
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:28022488-28022968 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663570	pseudogene	Chr5:28022488-28022968 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013026	pseudogene	Chr5:25695919-25696399 (+)
A/J	MGP_AJ_G0013014	pseudogene	Chr5:24835744-24836224 (+)
AKR/J	MGP_AKRJ_G0012979	pseudogene	Chr5:25809796-25810276 (+)
BALB/cJ	MGP_BALBcJ_G0012993	pseudogene	Chr5:25351816-25352296 (+)
C3H/HeJ	MGP_C3HHeJ_G0012845	pseudogene	Chr5:25912488-25912968 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013349	pseudogene	Chr5:27268163-27268643 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010215	pseudogene	Chr17:71416680-71417094 (-)
CAST/EiJ	MGP_CASTEiJ_G0012575	pseudogene	Chr5:24999299-24999779 (+)
CBA/J	MGP_CBAJ_G0012812	pseudogene	Chr5:27780488-27780968 (+)
DBA/2J	MGP_DBA2J_G0012888	pseudogene	Chr5:25062099-25062579 (+)
FVB/NJ	MGP_FVBNJ_G0012893	pseudogene	Chr5:24510212-24510692 (+)
LP/J	MGP_LPJ_G0012961	pseudogene	Chr5:26138000-26138480 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012908	pseudogene	Chr5:28817489-28817969 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013354	pseudogene	Chr5:25468001-25468481 (+)
PWK/PhJ	MGP_PWKPhJ_G0012396	pseudogene	Chr5:24126199-24126679 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010751	pseudogene	Chr17:74152074-74152488 (-)
WSB/EiJ	MGP_WSBEiJ_G0012612	pseudogene	Chr5:25494993-25495473 (+)

Homology

• Gene Tree
  Gm43433
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm43433
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000105223 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105223	Ensembl Gene Model | MGI Sequence Detail	481	C57BL/6J
transcript	ENSMUST00000196573	Ensembl | MGI Sequence Detail	481	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17