Gm43467 Pseudogene Detail

Summary

• Symbol
  Gm43467
• Name
  predicted gene 43467

• Feature Type
  pseudogene
• IDs
  MGI:5663604
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:101218162-101218598 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663604	pseudogene	Chr3:101218162-101218598 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012319	pseudogene	Chr3:102478972-102479408 (+)
A/J	MGP_AJ_G0012313	pseudogene	Chr3:99237323-99237752 (+)
AKR/J	MGP_AKRJ_G0012279	pseudogene	Chr3:101682135-101682571 (+)
BALB/cJ	MGP_BALBcJ_G0012296	pseudogene	Chr3:98990658-98991087 (+)
C3H/HeJ	MGP_C3HHeJ_G0012161	pseudogene	Chr3:101974952-101975381 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012609	pseudogene	Chr3:106248352-106248788 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010990	pseudogene	Chr3:95432389-95432799 (+)
CAST/EiJ	MGP_CASTEiJ_G0011932	pseudogene	Chr3:101073942-101074378 (+)
CBA/J	MGP_CBAJ_G0012139	pseudogene	Chr3:109894065-109894494 (+)
DBA/2J	MGP_DBA2J_G0012195	pseudogene	Chr3:98475749-98476185 (+)
FVB/NJ	MGP_FVBNJ_G0012199	pseudogene	Chr3:96417917-96418353 (+)
LP/J	MGP_LPJ_G0012265	pseudogene	Chr3:103836149-103836585 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012201	pseudogene	Chr3:116094510-116094946 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012615	pseudogene	Chr3:101168139-101168575 (+)
PWK/PhJ	MGP_PWKPhJ_G0011777	pseudogene	Chr3:98232995-98233431 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011590	pseudogene	Chr3:99246456-99246890 (+)
WSB/EiJ	MGP_WSBEiJ_G0011962	pseudogene	Chr3:101731943-101732372 (+)

Homology

• Gene Tree
  Gm43467
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm43467
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000106316 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106316	Ensembl Gene Model | MGI Sequence Detail	437	C57BL/6J
transcript	ENSMUST00000197441	Ensembl | MGI Sequence Detail	437	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm43467:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr30900	Chr3:101217767-101217782 (+)	-387 bp