Gm43512 Pseudogene Detail

Summary

• Symbol
  Gm43512
• Name
  predicted gene 43512

• Feature Type
  pseudogene
• IDs
  MGI:5663649
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:52720342-52720517 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic

Strain
Comparison

• SNPs within 2kb
  47 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663649	pseudogene	Chr14:52720342-52720517 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014998	pseudogene	ChrX:162055315-162055490 (-)
A/J	MGP_AJ_G0014988	pseudogene	ChrX:161225847-161226022 (-)
AKR/J	MGP_AKRJ_G0014928	pseudogene	ChrX:166412126-166412301 (-)
BALB/cJ	MGP_BALBcJ_G0014942	pseudogene	ChrX:159228005-159228180 (-)
C3H/HeJ	MGP_C3HHeJ_G0014781	pseudogene	ChrX:162406844-162407019 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011366	pseudogene	Chr14:48609185-48609360 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013046	pseudogene	ChrX:152286516-152286691 (-)
CAST/EiJ	MGP_CASTEiJ_G0010793	pseudogene	Chr14:43726398-43726573 (-)
CBA/J	MGP_CBAJ_G0014765	pseudogene	ChrX:171627406-171627581 (-)
DBA/2J	MGP_DBA2J_G0014849	pseudogene	ChrX:160124619-160124794 (-)
FVB/NJ	MGP_FVBNJ_G0014831	pseudogene	ChrX:159256946-159257121 (-)
LP/J	MGP_LPJ_G0014950	pseudogene	ChrX:163199578-163199753 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014877	pseudogene	ChrX:180320764-180320939 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015412	pseudogene	ChrX:161543933-161544108 (-)
PWK/PhJ	MGP_PWKPhJ_G0014175	pseudogene	ChrX:138165711-138165886 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013961	pseudogene	ChrX:141885125-141885300 (-)
WSB/EiJ	MGP_WSBEiJ_G0014464	pseudogene	ChrX:159507204-159507379 (-)

Homology

• Gene Tree
  Gm43512
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm43512
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000105343 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105343	Ensembl Gene Model | MGI Sequence Detail	176	C57BL/6J
transcript	ENSMUST00000198495	Ensembl | MGI Sequence Detail	176	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;