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Gm43538 Gene Detail
Summary
  • Symbol
    Gm43538
  • Name
    predicted gene 43538
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5663675
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:38668396-38669707 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    70 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5663675
 lncRNA gene Chr3:38668396-38669707 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006169
 lincRNA gene Chr3:36505214-36506521 (+)
A/J MGP_AJ_G0006161
 lincRNA gene Chr3:35758959-35760266 (+)
AKR/J MGP_AKRJ_G0006137
 lincRNA gene Chr3:36432843-36434150 (+)
BALB/cJ MGP_BALBcJ_G0006137
 lincRNA gene Chr3:35510805-35512116 (+)
C3H/HeJ MGP_C3HHeJ_G0006087
 lincRNA gene Chr3:36508831-36510138 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006299
 lincRNA gene Chr3:38168476-38169787 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005610
 lincRNA gene Chr3:33420554-33421834 (+)
CAST/EiJ MGP_CASTEiJ_G0006022
 lincRNA gene Chr3:36394086-36395393 (+)
CBA/J MGP_CBAJ_G0006072
 lincRNA gene Chr3:39226329-39227636 (+)
DBA/2J MGP_DBA2J_G0006091
 lincRNA gene Chr3:35221908-35223215 (+)
FVB/NJ MGP_FVBNJ_G0006115
 lincRNA gene Chr3:34635144-34636455 (+)
LP/J MGP_LPJ_G0006173
 lincRNA gene Chr3:37327517-37328824 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006105
 lincRNA gene Chr3:41694623-41695930 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006303
 lincRNA gene Chr3:36294752-36296059 (+)
PWK/PhJ MGP_PWKPhJ_G0005967
 lincRNA gene Chr3:34906699-34908010 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005876
 lincRNA gene Chr3:35652039-35653346 (+)
WSB/EiJ MGP_WSBEiJ_G0006069
 lincRNA gene Chr3:36309523-36310830 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106168 Ensembl Gene Model | MGI Sequence Detail 1312 C57BL/6J ±  kb
transcript ENSMUST00000200416 Ensembl | MGI Sequence Detail 849 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Phenotypes 5
  • Earliest
    J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
  • Latest
    J:157707 Puligilla C, et al., Sox2 induces neuronal formation in the developing mammalian cochlea. J Neurosci. 2010 Jan 13;30(2):714-22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory