Gm43544 Gene Detail

Summary

• Symbol
  Gm43544
• Name
  predicted gene 43544

• Feature Type
  unclassified gene
• IDs
  MGI:5663681
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:138997951-139000422 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663681	unclassified gene	Chr1:138997951-139000422 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0000623	unclassified gene	Chr1:143121098-143123569 (+)
A/J	MGP_AJ_G0000597	unclassified gene	Chr1:137553927-137556387 (+)
AKR/J	MGP_AKRJ_G0000586	unclassified gene	Chr1:141716078-141718535 (+)
BALB/cJ	MGP_BALBcJ_G0000589	unclassified gene	Chr1:137911607-137914078 (+)
C3H/HeJ	MGP_C3HHeJ_G0000576	unclassified gene	Chr1:141802520-141804980 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0000706	unclassified gene	Chr1:148131164-148133623 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000451	unclassified gene	Chr1:130623936-130626386 (+)
CAST/EiJ	MGP_CASTEiJ_G0000570	unclassified gene	Chr1:140958254-140961231 (+)
CBA/J	MGP_CBAJ_G0000567	unclassified gene	Chr1:153240535-153242995 (+)
DBA/2J	MGP_DBA2J_G0000571	unclassified gene	Chr1:136565192-136567649 (+)
FVB/NJ	MGP_FVBNJ_G0000585	unclassified gene	Chr1:135198108-135200568 (+)
LP/J	MGP_LPJ_G0000629	unclassified gene	Chr1:144219565-144222036 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000580	unclassified gene	Chr1:158907546-158910007 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0000698	unclassified gene	Chr1:141495817-141500609 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0000498	unclassified gene	Chr1:140451059-140453530 (+)
WSB/EiJ	MGP_WSBEiJ_G0000573	unclassified gene	Chr1:141506134-141508591 (+)

Homology

• Gene Tree
  Gm43544
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000105936 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105936	Ensembl Gene Model | MGI Sequence Detail	2472	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;