Gm43548 Gene Detail

Summary

• Symbol
  Gm43548
• Name
  predicted gene 43548

• Feature Type
  unclassified gene
• IDs
  MGI:5663685
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:55482342-55484694 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  202 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663685	unclassified gene	Chr3:55482342-55484694 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001162	unclassified gene	Chr3:54319257-54321609 (+)
A/J	MGP_AJ_G0001142	unclassified gene	Chr3:52641461-52643813 (+)
AKR/J	MGP_AKRJ_G0001128	unclassified gene	Chr3:53729721-53732083 (+)
BALB/cJ	MGP_BALBcJ_G0001135	unclassified gene	Chr3:52484869-52487221 (+)
C3H/HeJ	MGP_C3HHeJ_G0001116	unclassified gene	Chr3:53927726-53930078 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001250	unclassified gene	Chr3:56359716-56362068 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000968	unclassified gene	Chr3:49151617-49153996 (+)
CAST/EiJ	MGP_CASTEiJ_G0001099	unclassified gene	Chr3:54082039-54084421 (+)
CBA/J	MGP_CBAJ_G0001107	unclassified gene	Chr3:58192011-58194363 (+)
DBA/2J	MGP_DBA2J_G0001111	unclassified gene	Chr3:52190932-52193294 (+)
FVB/NJ	MGP_FVBNJ_G0001122	unclassified gene	Chr3:51184084-51186446 (+)
LP/J	MGP_LPJ_G0001170	unclassified gene	Chr3:55031882-55034234 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001111	unclassified gene	Chr3:62277040-62279402 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001241	unclassified gene	Chr3:53642016-53644368 (+)
PWK/PhJ	MGP_PWKPhJ_G0001057	unclassified gene	Chr3:51863417-51865805 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001033	unclassified gene	Chr3:53392281-53394663 (+)
WSB/EiJ	MGP_WSBEiJ_G0001115	unclassified gene	Chr3:53769890-53772244 (+)

Homology

• Gene Tree
  Gm43548
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105627 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105627	Ensembl Gene Model | MGI Sequence Detail	2353	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;