Gm43570 Gene Detail

Summary

• Symbol
  Gm43570
• Name
  predicted gene 43570

• Feature Type
  lncRNA gene
• IDs
  MGI:5663707
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:58909892-58913579 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663707	lncRNA gene	Chr3:58909892-58913579 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003753	antisense lncRNA gene	Chr3:57870840-57874525 (-)
A/J	MGP_AJ_G0003733	antisense lncRNA gene	Chr3:56063598-56067284 (-)
AKR/J	MGP_AKRJ_G0003710	antisense lncRNA gene	Chr3:57223920-57227603 (-)
BALB/cJ	MGP_BALBcJ_G0003722	antisense lncRNA gene	Chr3:55864385-55868073 (-)
C3H/HeJ	MGP_C3HHeJ_G0003669	antisense lncRNA gene	Chr3:57433218-57436905 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003863	antisense lncRNA gene	Chr3:60004857-60008548 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003367	antisense lncRNA gene	Chr3:52412804-52416271 (-)
CAST/EiJ	MGP_CASTEiJ_G0003632	antisense lncRNA gene	Chr3:57613589-57617281 (-)
CBA/J	MGP_CBAJ_G0003665	antisense lncRNA gene	Chr3:61984949-61988630 (-)
DBA/2J	MGP_DBA2J_G0003674	antisense lncRNA gene	Chr3:55565517-55569198 (-)
FVB/NJ	MGP_FVBNJ_G0003695	antisense lncRNA gene	Chr3:54520027-54523876 (-)
LP/J	MGP_LPJ_G0003754	antisense lncRNA gene	Chr3:58627608-58631325 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003683	antisense lncRNA gene	Chr3:66133470-66137146 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003864	antisense lncRNA gene	Chr3:57194695-57198376 (-)
PWK/PhJ	MGP_PWKPhJ_G0003589	antisense lncRNA gene	Chr3:55199063-55203219 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003531	antisense lncRNA gene	Chr3:56892691-56896367 (-)
WSB/EiJ	MGP_WSBEiJ_G0003668	antisense lncRNA gene	Chr3:57265316-57269031 (-)

Homology

• Gene Tree
  Gm43570
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000105945 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105945	Ensembl Gene Model | MGI Sequence Detail	3688	C57BL/6J
transcript	ENSMUST00000199951	Ensembl | MGI Sequence Detail	3688	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;