Gm43586 Pseudogene Detail

Summary

• Symbol
  Gm43586
• Name
  predicted gene 43586

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5663723
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:70017322-70017631 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663723	pseudogenic gene segment	Chr6:70017322-70017631 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0000284	pseudogenic gene segment	Chr6:70381289-70381598 (-)
A/J	MGP_AJ_G0000256	pseudogenic gene segment	Chr6:67601129-67601438 (-)
AKR/J	MGP_AKRJ_G0000257	pseudogenic gene segment	Chr6:69549170-69549479 (-)
BALB/cJ	MGP_BALBcJ_G0000252	pseudogenic gene segment	Chr6:67749432-67749741 (-)
C3H/HeJ	MGP_C3HHeJ_G0000215	pseudogenic gene segment	Chr6:114672660-114672969 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0000375	pseudogenic gene segment	Chr6:72152561-72152870 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000120	pseudogenic gene segment	Chr6:67143403-67143704 (-)
CAST/EiJ	MGP_CASTEiJ_G0000244	pseudogenic gene segment	Chr6:69500697-69501006 (-)
CBA/J	MGP_CBAJ_G0000242	pseudogenic gene segment	Chr6:75016812-75017121 (-)
DBA/2J	MGP_DBA2J_G0000240	pseudogenic gene segment	Chr6:67038994-67039303 (-)
FVB/NJ	MGP_FVBNJ_G0000246	pseudogenic gene segment	Chr6:66462498-66462807 (-)
LP/J	MGP_LPJ_G0000294	pseudogenic gene segment	Chr6:70243745-70244054 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000255	pseudogenic gene segment	Chr6:78732526-78732835 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0000351	pseudogenic gene segment	Chr6:69488677-69488986 (-)
PWK/PhJ	MGP_PWKPhJ_G0000209	pseudogenic gene segment	Chr6:66085874-66086183 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0000187	pseudogenic gene segment	Chr6:68360482-68360787 (-)
WSB/EiJ	MGP_WSBEiJ_G0000244	pseudogenic gene segment	Chr6:69775276-69775581 (-)

Homology

• Gene Tree
  Gm43586
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000106226 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106226	Ensembl Gene Model | MGI Sequence Detail	310	C57BL/6J
transcript	ENSMUST00000195948	Ensembl | MGI Sequence Detail	310	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;