Gm43668 Gene Detail

Summary

• Symbol
  Gm43668
• Name
  predicted gene 43668

• Feature Type
  unclassified gene
• IDs
  MGI:5663805
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:34124808-34130149 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  223 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663805	unclassified gene	Chr3:34124808-34130149 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001090	unclassified gene	Chr3:31717580-31722914 (+)
A/J	MGP_AJ_G0001069	unclassified gene	Chr3:31230248-31235581 (+)
AKR/J	MGP_AKRJ_G0001055	unclassified gene	Chr3:31755237-31760567 (+)
BALB/cJ	MGP_BALBcJ_G0001062	unclassified gene	Chr3:30874140-30879477 (+)
C3H/HeJ	MGP_C3HHeJ_G0001043	unclassified gene	Chr3:31802351-31807678 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001178	unclassified gene	Chr3:33299932-33305264 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000900	unclassified gene	Chr3:28999850-29004495 (+)
CAST/EiJ	MGP_CASTEiJ_G0001029	unclassified gene	Chr3:31632458-31637774 (+)
CBA/J	MGP_CBAJ_G0001034	unclassified gene	Chr3:34168008-34173339 (+)
DBA/2J	MGP_DBA2J_G0001038	unclassified gene	Chr3:30704760-30710095 (+)
FVB/NJ	MGP_FVBNJ_G0001049	unclassified gene	Chr3:30152170-30157509 (+)
LP/J	MGP_LPJ_G0001098	unclassified gene	Chr3:32497151-32502485 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001041	unclassified gene	Chr3:36676863-36682198 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001168	unclassified gene	Chr3:31554957-31560291 (+)
PWK/PhJ	MGP_PWKPhJ_G0000987	unclassified gene	Chr3:30257114-30262499 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0000962	unclassified gene	Chr3:30950103-30955548 (+)
WSB/EiJ	MGP_WSBEiJ_G0001042	unclassified gene	Chr3:31569484-31574819 (+)

Homology

• Gene Tree
  Gm43668
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105176 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105176	Ensembl Gene Model | MGI Sequence Detail	5342	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm43668:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr28797	Chr3:34123542-34123551 (+)	-1,261 bp