Gm43712 Pseudogene Detail

Summary

• Symbol
  Gm43712
• Name
  predicted gene 43712

• Feature Type
  pseudogene
• IDs
  MGI:5663849
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:90034074-90034364 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663849	pseudogene	Chr3:90034074-90034364 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040307	pseudogene	Chr3:90404320-90404610 (+)
A/J	MGP_AJ_G0040292	pseudogene	Chr3:87400997-87401394 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0040291	pseudogene	Chr3:87366635-87366925 (+)
C3H/HeJ	MGP_C3HHeJ_G0039924	pseudogene	Chr3:89717746-89718496 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040880	pseudogene	Chr3:93804422-93804712 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038634	pseudogene	Chr1:62304107-62304477 (+)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0040089	pseudogene	Chr3:86775368-86777545 (+)
FVB/NJ	MGP_FVBNJ_G0040044	pseudogene	Chr3:85109046-85109336 (+)
LP/J	MGP_LPJ_G0039722	pseudogene	Chr1:64206657-64207030 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040041	pseudogene	Chr3:103233029-103233520 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040986	pseudogene	Chr3:89298679-89298969 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0038851	pseudogene	Chr1:62467213-62469071 (+)

Homology

• Gene Tree
  Gm43712
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm43712
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000104649 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104649	Ensembl Gene Model | MGI Sequence Detail	291	C57BL/6J
transcript	ENSMUST00000198020	Ensembl | MGI Sequence Detail	291	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426