Gm43814 Gene Detail

Summary

• Symbol
  Gm43814
• Name
  predicted gene 43814

• Feature Type
  unclassified gene
• IDs
  MGI:5663951
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr9:110881849-110882261 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663951	unclassified gene	Chr9:110881849-110882261 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002401	unclassified gene	Chr9:113253286-113253698 (-)
A/J	MGP_AJ_G0002380	unclassified gene	Chr9:109121564-109121976 (-)
AKR/J	MGP_AKRJ_G0002364	unclassified gene	Chr9:111843237-111843649 (-)
BALB/cJ	MGP_BALBcJ_G0002375	unclassified gene	Chr9:108874176-108874588 (-)
C3H/HeJ	MGP_C3HHeJ_G0002352	unclassified gene	Chr9:112342966-112343378 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002501	unclassified gene	Chr9:116383301-116383713 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002099	unclassified gene	Chr9:106332802-106333214 (-)
CAST/EiJ	MGP_CASTEiJ_G0002313	unclassified gene	Chr9:112147286-112147697 (-)
CBA/J	MGP_CBAJ_G0002345	unclassified gene	Chr9:120664466-120664878 (-)
DBA/2J	MGP_DBA2J_G0002349	unclassified gene	Chr9:108576183-108576595 (-)
FVB/NJ	MGP_FVBNJ_G0002357	unclassified gene	Chr9:107422265-107422677 (-)
LP/J	MGP_LPJ_G0002402	unclassified gene	Chr9:113541677-113542089 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002332	unclassified gene	Chr9:121980278-121980690 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002489	unclassified gene	Chr9:112192166-112192578 (-)
PWK/PhJ	MGP_PWKPhJ_G0002273	unclassified gene	Chr9:108823589-108824058 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002232	unclassified gene	Chr9:112279913-112280325 (-)
WSB/EiJ	MGP_WSBEiJ_G0002343	unclassified gene	Chr9:112056342-112056754 (-)

Homology

• Gene Tree
  Gm43814
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000104654 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104654	Ensembl Gene Model | MGI Sequence Detail	413	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm43814:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr91685	Chr9:110884205-110884222 (-)	-1,953 bp
Tssr91684	Chr9:110884072-110884084 (-)	-1,817 bp
Tssr91683	Chr9:110883002-110883025 (-)	-753 bp
Tssr91682	Chr9:110882945-110882957 (-)	-690 bp
Tssr91681	Chr9:110882901-110882916 (-)	-648 bp
Tssr91680	Chr9:110882721-110882742 (-)	-471 bp
Tssr91679	Chr9:110882687-110882707 (-)	-436 bp