Gm43833 Pseudogene Detail

Summary

• Symbol
  Gm43833
• Name
  predicted gene 43833

• Feature Type
  pseudogene
• IDs
  MGI:5663970
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:153454936-153455228 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  165 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663970	pseudogene	Chr3:153454936-153455228 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012477	pseudogene	Chr3:157699756-157700048 (+)
A/J	MGP_AJ_G0012473	pseudogene	Chr3:151962404-151962696 (+)
AKR/J	MGP_AKRJ_G0012437	pseudogene	Chr3:156023620-156023912 (+)
BALB/cJ	MGP_BALBcJ_G0012455	pseudogene	Chr3:151769769-151770061 (+)
C3H/HeJ	MGP_C3HHeJ_G0012318	pseudogene	Chr3:156399514-156399806 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012769	pseudogene	Chr3:162838435-162838727 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011123	pseudogene	Chr3:146743618-146743915 (+)
CAST/EiJ	MGP_CASTEiJ_G0012083	pseudogene	Chr3:156502414-156502706 (+)
CBA/J	MGP_CBAJ_G0012298	pseudogene	Chr3:168707984-168708276 (+)
DBA/2J	MGP_DBA2J_G0012351	pseudogene	Chr3:151046595-151046887 (+)
FVB/NJ	MGP_FVBNJ_G0012353	pseudogene	Chr3:148416741-148417033 (+)
LP/J	MGP_LPJ_G0012427	pseudogene	Chr3:159035869-159036161 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012359	pseudogene	Chr3:177184694-177184986 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012772	pseudogene	Chr3:155662730-155663022 (+)
PWK/PhJ	MGP_PWKPhJ_G0011922	pseudogene	Chr3:150959034-150959326 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011739	pseudogene	Chr3:153826692-153826984 (+)
WSB/EiJ	MGP_WSBEiJ_G0012111	pseudogene	Chr3:156649196-156649488 (+)

Homology

• Gene Tree
  Gm43833
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000106011 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106011	Ensembl Gene Model | MGI Sequence Detail	293	C57BL/6J
transcript	ENSMUST00000198828	Ensembl | MGI Sequence Detail	293	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;