Gm43863 Gene Detail

Summary

• Symbol
  Gm43863
• Name
  predicted gene, 43863

• Feature Type
  unclassified gene
• IDs
  MGI:5690255
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:117893492-117894683 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690255	unclassified gene	Chr6:117893492-117894683 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002067	unclassified gene	Chr6:120634691-120635882 (-)
A/J	MGP_AJ_G0002043	unclassified gene	Chr6:116025521-116026712 (-)
AKR/J	MGP_AKRJ_G0002029	unclassified gene	Chr6:119144336-119145527 (-)
BALB/cJ	MGP_BALBcJ_G0002040	unclassified gene	Chr6:115801068-115802259 (-)
C3H/HeJ	MGP_C3HHeJ_G0001887	unclassified gene	Chr6:65155840-65157031 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002162	unclassified gene	Chr6:123743659-123744850 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001795	unclassified gene	Chr6:112948524-112949723 (-)
CAST/EiJ	MGP_CASTEiJ_G0001982	unclassified gene	Chr6:119516903-119518103 (-)
CBA/J	MGP_CBAJ_G0002010	unclassified gene	Chr6:128626576-128627767 (-)
DBA/2J	MGP_DBA2J_G0002014	unclassified gene	Chr6:114925008-114926199 (-)
FVB/NJ	MGP_FVBNJ_G0002022	unclassified gene	Chr6:114056442-114057637 (-)
LP/J	MGP_LPJ_G0002069	unclassified gene	Chr6:120665146-120666337 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001999	unclassified gene	Chr6:132737625-132738816 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002152	unclassified gene	Chr6:119168488-119169679 (-)
PWK/PhJ	MGP_PWKPhJ_G0001944	unclassified gene	Chr6:113931641-113932841 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001905	unclassified gene	Chr6:117883485-117884668 (-)
WSB/EiJ	MGP_WSBEiJ_G0002008	unclassified gene	Chr6:119437900-119439100 (-)

Homology

• Gene Tree
  Gm43863
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  4
• Gene trapped
  4
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000107608 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107608	Ensembl Gene Model | MGI Sequence Detail	1192	C57BL/6J

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;

TSS for Gm43863:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr1980	Chr6:117893772-117893781 (-)	906 bp