Gm43900 Gene Detail

Summary

• Symbol
  Gm43900
• Name
  predicted gene, 43900

• Feature Type
  unclassified gene
• IDs
  MGI:5690292
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:80804119-80806787 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  228 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690292	unclassified gene	Chr6:80804119-80806787 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001971	unclassified gene	Chr6:81737809-81740478 (+)
A/J	MGP_AJ_G0001948	unclassified gene	Chr6:78572701-78575365 (+)
AKR/J	MGP_AKRJ_G0001935	unclassified gene	Chr6:80843096-80845769 (+)
BALB/cJ	MGP_BALBcJ_G0001945	unclassified gene	Chr6:78631561-78634225 (+)
C3H/HeJ	MGP_C3HHeJ_G0001980	unclassified gene	Chr6:103494792-103497460 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002066	unclassified gene	Chr6:83944093-83946761 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001721	unclassified gene	Chr6:77108843-77111494 (+)
CAST/EiJ	MGP_CASTEiJ_G0001889	unclassified gene	Chr6:80834258-80836920 (+)
CBA/J	MGP_CBAJ_G0001915	unclassified gene	Chr6:87232456-87235124 (+)
DBA/2J	MGP_DBA2J_G0001919	unclassified gene	Chr6:77912544-77915212 (+)
FVB/NJ	MGP_FVBNJ_G0001927	unclassified gene	Chr6:77182229-77184893 (+)
LP/J	MGP_LPJ_G0001973	unclassified gene	Chr6:81696687-81699354 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001905	unclassified gene	Chr6:91583294-91585958 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002056	unclassified gene	Chr6:80691968-80694632 (+)
PWK/PhJ	MGP_PWKPhJ_G0001852	unclassified gene	Chr6:76828777-76831502 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001814	unclassified gene	Chr6:79547877-79550530 (+)
WSB/EiJ	MGP_WSBEiJ_G0001915	unclassified gene	Chr6:81126494-81129173 (+)

Homology

• Gene Tree
  Gm43900
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm43900
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000108040 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108040	Ensembl Gene Model | MGI Sequence Detail	2669	C57BL/6J

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48