Gm43925 Pseudogene Detail

Summary

• Symbol
  Gm43925
• Name
  predicted gene, 43925

• Feature Type
  pseudogene
• IDs
  MGI:5690317
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:140730225-140730430 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690317	pseudogene	Chr6:140730225-140730430 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013760	pseudogene	Chr6:145528411-145528616 (-)
A/J	MGP_AJ_G0013755	pseudogene	Chr6:139741473-139741678 (-)
AKR/J	MGP_AKRJ_G0013710	pseudogene	Chr6:143930604-143930809 (-)
BALB/cJ	MGP_BALBcJ_G0013736	pseudogene	Chr6:139593753-139593958 (-)
C3H/HeJ	MGP_C3HHeJ_G0013566	pseudogene	Chr6:144007319-144007524 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014131	pseudogene	Chr6:149496416-149496621 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012080	pseudogene	Chr6:138644352-138644558 (-)
CAST/EiJ	MGP_CASTEiJ_G0013250	pseudogene	Chr6:143562609-143562802 (-)
CBA/J	MGP_CBAJ_G0013543	pseudogene	Chr6:155216752-155216957 (-)
DBA/2J	MGP_DBA2J_G0013623	pseudogene	Chr6:138605398-138605603 (-)
FVB/NJ	MGP_FVBNJ_G0013619	pseudogene	Chr6:137401261-137401466 (-)
LP/J	MGP_LPJ_G0013704	pseudogene	Chr6:145654749-145654954 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013634	pseudogene	Chr6:159055873-159056078 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014112	pseudogene	Chr6:143770634-143770839 (-)
PWK/PhJ	MGP_PWKPhJ_G0013062	pseudogene	Chr6:137107935-137108140 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012840	pseudogene	Chr6:141993738-141993943 (-)
WSB/EiJ	MGP_WSBEiJ_G0013311	pseudogene	Chr6:144436678-144436883 (-)

Homology

• Gene Tree
  Gm43925
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108039 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108039	Ensembl Gene Model | MGI Sequence Detail	206	C57BL/6J
transcript	ENSMUST00000203498	Ensembl | MGI Sequence Detail	206	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;