Gm43929 Pseudogene Detail

Summary

• Symbol
  Gm43929
• Name
  predicted gene, 43929

• Feature Type
  pseudogene
• IDs
  MGI:5690321
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:116958980-116959388 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690321	pseudogene	Chr6:116958980-116959388 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013666	pseudogene	Chr6:119674679-119675087 (+)
A/J	MGP_AJ_G0013651	pseudogene	Chr6:115084173-115084581 (+)
AKR/J	MGP_AKRJ_G0013614	pseudogene	Chr6:118164573-118164981 (+)
BALB/cJ	MGP_BALBcJ_G0013630	pseudogene	Chr6:114872579-114872987 (+)
C3H/HeJ	MGP_C3HHeJ_G0013308	pseudogene	Chr6:66132811-66133219 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014018	pseudogene	Chr6:122736435-122736843 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012026	pseudogene	Chr6:112060699-112061103 (+)
CAST/EiJ	MGP_CASTEiJ_G0013164	pseudogene	Chr6:118541636-118542044 (+)
CBA/J	MGP_CBAJ_G0013449	pseudogene	Chr6:127584215-127584623 (+)
DBA/2J	MGP_DBA2J_G0013528	pseudogene	Chr6:114009132-114009540 (+)
FVB/NJ	MGP_FVBNJ_G0013528	pseudogene	Chr6:113162268-113162676 (+)
LP/J	MGP_LPJ_G0013605	pseudogene	Chr6:119698586-119698994 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013542	pseudogene	Chr6:131715032-131715440 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014011	pseudogene	Chr6:118208016-118208424 (+)
PWK/PhJ	MGP_PWKPhJ_G0012971	pseudogene	Chr6:112996277-112996685 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012756	pseudogene	Chr6:116923151-116923555 (+)
WSB/EiJ	MGP_WSBEiJ_G0013218	pseudogene	Chr6:118480812-118481220 (+)

Homology

• Gene Tree
  Gm43929
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107415 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107415	Ensembl Gene Model | MGI Sequence Detail	409	C57BL/6J
transcript	ENSMUST00000203025	Ensembl | MGI Sequence Detail	409	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;