Gm44003 Pseudogene Detail

Summary

• Symbol
  Gm44003
• Name
  predicted gene, 44003

• Feature Type
  pseudogene
• IDs
  MGI:5690395
  NCBI Gene: 108169187
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:132365849-132366338 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690395	pseudogene	Chr6:132365849-132378944 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0013730	pseudogene	Chr6:131050518-131051006 (-)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0013710	pseudogene	Chr6:130748018-130748506 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0014103	pseudogene	Chr6:140092960-140093449 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0013517	pseudogene	Chr6:145465972-145466460 (-)
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0013680	pseudogene	Chr6:136662709-136663197 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0014084	pseudogene	Chr6:134940546-134941035 (-)
PWK/PhJ	MGP_PWKPhJ_G0013037	pseudogene	Chr6:128175992-128176480 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012811	pseudogene	Chr6:133102204-133102693 (-)
WSB/EiJ	MGP_WSBEiJ_G0013284	pseudogene	Chr6:135486680-135487169 (-)

Homology

• Gene Tree
  Gm44003
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13

• Ensembl
  ENSMUSG00000107805 (Evidence)
• NCBI Gene
  108169187

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107805	Ensembl Gene Model | MGI Sequence Detail	490	C57BL/6J
transcript	ENSMUST00000203024	Ensembl | MGI Sequence Detail	490	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;