Gm44013 Gene Detail

Summary

• Symbol
  Gm44013
• Name
  predicted gene, 44013

• Feature Type
  unclassified gene
• IDs
  MGI:5690405
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:140565888-140568149 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690405	unclassified gene	Chr6:140565888-140568149 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002107	unclassified gene	Chr6:145350896-145353174 (-)
A/J	MGP_AJ_G0002082	unclassified gene	Chr6:139568727-139571045 (-)
AKR/J	MGP_AKRJ_G0002069	unclassified gene	Chr6:143755596-143757863 (-)
BALB/cJ	MGP_BALBcJ_G0002079	unclassified gene	Chr6:139419735-139421996 (-)
C3H/HeJ	MGP_C3HHeJ_G0002055	unclassified gene	Chr6:143834424-143836705 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002203	unclassified gene	Chr6:149293397-149295668 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001828	unclassified gene	Chr6:138483176-138485849 (-)
CAST/EiJ	MGP_CASTEiJ_G0002022	unclassified gene	Chr6:143387028-143389312 (-)
CBA/J	MGP_CBAJ_G0002049	unclassified gene	Chr6:154988104-154990360 (-)
DBA/2J	MGP_DBA2J_G0002054	unclassified gene	Chr6:138439920-138442210 (-)
FVB/NJ	MGP_FVBNJ_G0002063	unclassified gene	Chr6:137227804-137230100 (-)
LP/J	MGP_LPJ_G0002107	unclassified gene	Chr6:145473486-145475839 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002038	unclassified gene	Chr6:158865221-158867471 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002192	unclassified gene	Chr6:143596132-143598416 (-)
PWK/PhJ	MGP_PWKPhJ_G0001983	unclassified gene	Chr6:136934569-136936827 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001944	unclassified gene	Chr6:141819393-141821649 (-)
WSB/EiJ	MGP_WSBEiJ_G0002047	unclassified gene	Chr6:144250681-144252946 (-)

Homology

• Gene Tree
  Gm44013
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000107750 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107750	Ensembl Gene Model | MGI Sequence Detail	2262	C57BL/6J

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;

TSS for Gm44013:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr63924	Chr6:140566313-140566333 (-)	1,826 bp