Gm44060 Pseudogene Detail

Summary

• Symbol
  Gm44060
• Name
  predicted gene, 44060

• Feature Type
  pseudogene
• IDs
  MGI:5690452
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:65248485-65248894 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690452	pseudogene	Chr6:65248485-65248894 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013498	pseudogene	Chr6:65194570-65194983 (-)
A/J	MGP_AJ_G0013484	pseudogene	Chr6:62350202-62350611 (-)
AKR/J	MGP_AKRJ_G0013451	pseudogene	Chr6:64319873-64320286 (-)
BALB/cJ	MGP_BALBcJ_G0013463	pseudogene	Chr6:62751831-62752240 (-)
C3H/HeJ	MGP_C3HHeJ_G0013474	pseudogene	Chr6:119905601-119906014 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013848	pseudogene	Chr6:66713455-66713864 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011920	pseudogene	Chr6:59667309-59667723 (-)
CAST/EiJ	MGP_CASTEiJ_G0013016	pseudogene	Chr6:64590586-64591010 (-)
CBA/J	MGP_CBAJ_G0013280	pseudogene	Chr6:69429885-69430294 (-)
DBA/2J	MGP_DBA2J_G0013364	pseudogene	Chr6:62043604-62044013 (-)
FVB/NJ	MGP_FVBNJ_G0013363	pseudogene	Chr6:61573419-61573828 (-)
LP/J	MGP_LPJ_G0013434	pseudogene	Chr6:65137299-65137712 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013382	pseudogene	Chr6:73185450-73185859 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013846	pseudogene	Chr6:64280915-64281324 (-)
PWK/PhJ	MGP_PWKPhJ_G0012823	pseudogene	Chr6:61192617-61193055 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012607	pseudogene	Chr6:63793087-63794060 (-)
WSB/EiJ	MGP_WSBEiJ_G0013063	pseudogene	Chr6:64555460-64555861 (-)

Homology

• Gene Tree
  Gm44060
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108097 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108097	Ensembl Gene Model | MGI Sequence Detail	410	C57BL/6J
transcript	ENSMUST00000204440	Ensembl | MGI Sequence Detail	410	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;