Gm44098 Pseudogene Detail

Summary

• Symbol
  Gm44098
• Name
  predicted gene, 44098

• Feature Type
  pseudogene
• IDs
  MGI:5690490
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:92517594-92517639 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690490	pseudogene	Chr1:92517594-92517639 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039903	pseudogene	Chr1:94179724-94179769 (+)
A/J	MGP_AJ_G0039910	pseudogene	Chr1:90805010-90805055 (+)
AKR/J	MGP_AKRJ_G0039832	pseudogene	Chr1:93490516-93490561 (+)
BALB/cJ	MGP_BALBcJ_G0039887	pseudogene	Chr1:90970215-90970260 (+)
C3H/HeJ	MGP_C3HHeJ_G0039534	pseudogene	Chr1:93741167-93741212 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040457	pseudogene	Chr1:97780134-97780179 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037036	pseudogene	Chr1:85052734-85052779 (+)
CAST/EiJ	MGP_CASTEiJ_G0038650	pseudogene	Chr1:93049058-93049103 (+)
CBA/J	MGP_CBAJ_G0039500	pseudogene	Chr1:100926741-100926786 (+)
DBA/2J	MGP_DBA2J_G0039705	pseudogene	Chr1:90005158-90005203 (+)
FVB/NJ	MGP_FVBNJ_G0039666	pseudogene	Chr1:89059878-89059923 (+)
LP/J	MGP_LPJ_G0039740	pseudogene	Chr1:95368365-95368410 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039658	pseudogene	Chr1:104076640-104076685 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040552	pseudogene	Chr1:93498529-93498574 (+)
PWK/PhJ	MGP_PWKPhJ_G0038330	pseudogene	Chr1:89423708-89423753 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038064	pseudogene	Chr1:92448480-92448525 (+)
WSB/EiJ	MGP_WSBEiJ_G0038867	pseudogene	Chr1:93309969-93310014 (+)

Homology

• Gene Tree
  Gm44098
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107778 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107778	Ensembl Gene Model | MGI Sequence Detail	46	C57BL/6J
transcript	ENSMUST00000204141	Ensembl | MGI Sequence Detail	46	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;