Gm44115 Gene Detail

Summary

• Symbol
  Gm44115
• Name
  predicted gene, 44115

• Feature Type
  lncRNA gene
• IDs
  MGI:5690507
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:148603496-148613767 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  54 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690507	lncRNA gene	Chr6:148603496-148613767 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007106	lincRNA gene	Chr6:153801934-153812070 (+)
A/J	MGP_AJ_G0007103	lincRNA gene	Chr6:147688982-147699022 (+)
AKR/J	MGP_AKRJ_G0007071	lincRNA gene	Chr6:152096182-152107003 (+)
BALB/cJ	MGP_BALBcJ_G0007078	lincRNA gene	Chr6:147453489-147464273 (+)
C3H/HeJ	MGP_C3HHeJ_G0007023	lincRNA gene	Chr6:152135147-152145729 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007243	lincRNA gene	Chr6:157878643-157892208 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006468	lincRNA gene	Chr6:146411418-146423585 (+)
CAST/EiJ	MGP_CASTEiJ_G0006929	lincRNA gene	Chr6:151817126-151828379 (+)
CBA/J	MGP_CBAJ_G0007003	lincRNA gene	Chr6:163952539-163963925 (+)
DBA/2J	MGP_DBA2J_G0007025	lincRNA gene	Chr6:146485872-146495935 (+)
FVB/NJ	MGP_FVBNJ_G0007048	lincRNA gene	Chr6:145178101-145188604 (+)
LP/J	MGP_LPJ_G0007109	lincRNA gene	Chr6:153920493-153935809 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007028	lincRNA gene	Chr6:167570976-167584215 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007250	lincRNA gene	Chr6:151942155-151953532 (+)
PWK/PhJ	MGP_PWKPhJ_G0006873	lincRNA gene	Chr6:144994796-145003158 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006783	lincRNA gene	Chr6:150046993-150059749 (+)
WSB/EiJ	MGP_WSBEiJ_G0006990	lincRNA gene	Chr6:152566376-152576462 (+)

Homology

• Gene Tree
  Gm44115
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107405 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107405	Ensembl Gene Model | MGI Sequence Detail	10272	C57BL/6J
transcript	ENSMUST00000203917	Ensembl | MGI Sequence Detail	2069	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;