Gm44162 Pseudogene Detail

Summary

• Symbol
  Gm44162
• Name
  predicted gene, 44162

• Feature Type
  pseudogene
• IDs
  MGI:5690554
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:110010350-110010893 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  179 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690554	pseudogene	Chr6:110010350-110010893 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013643	pseudogene	Chr6:112366880-112367423 (+)
A/J	MGP_AJ_G0013627	pseudogene	Chr6:108105857-108106400 (+)
AKR/J	MGP_AKRJ_G0013590	pseudogene	Chr6:110990110-110990653 (+)
BALB/cJ	MGP_BALBcJ_G0013607	pseudogene	Chr6:108045247-108045790 (+)
C3H/HeJ	MGP_C3HHeJ_G0013331	pseudogene	Chr6:73309286-73309829 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013993	pseudogene	Chr6:115318335-115318878 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012011	pseudogene	Chr6:105257569-105258112 (+)
CAST/EiJ	MGP_CASTEiJ_G0013146	pseudogene	Chr6:111384413-111384956 (+)
CBA/J	MGP_CBAJ_G0013425	pseudogene	Chr6:119791519-119792062 (+)
DBA/2J	MGP_DBA2J_G0013505	pseudogene	Chr6:107204171-107204714 (+)
FVB/NJ	MGP_FVBNJ_G0013506	pseudogene	Chr6:106231721-106232264 (+)
LP/J	MGP_LPJ_G0013582	pseudogene	Chr6:112448182-112448725 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013519	pseudogene	Chr6:124050258-124050801 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013984	pseudogene	Chr6:110959808-110960351 (+)
PWK/PhJ	MGP_PWKPhJ_G0012951	pseudogene	Chr6:106141680-106142223 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012735	pseudogene	Chr6:109751999-109752542 (+)
WSB/EiJ	MGP_WSBEiJ_G0013197	pseudogene	Chr6:111488352-111488895 (+)

Homology

• Gene Tree
  Gm44162
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107930 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107930	Ensembl Gene Model | MGI Sequence Detail	544	C57BL/6J
transcript	ENSMUST00000203543	Ensembl | MGI Sequence Detail	544	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;