Gm44169 Gene Detail

Summary

• Symbol
  Gm44169
• Name
  predicted gene, 44169

• Feature Type
  lncRNA gene
• IDs
  MGI:5690561
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:101496616-101514253 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  671 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690561	lncRNA gene	Chr6:101496616-101514253 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007034	lincRNA gene	Chr6:103621742-103640153 (+)
A/J	MGP_AJ_G0007030	lincRNA gene	Chr6:99621143-99638611 (+)
AKR/J	MGP_AKRJ_G0006999	lincRNA gene	Chr6:102358161-102375787 (+)
BALB/cJ	MGP_BALBcJ_G0007005	lincRNA gene	Chr6:99596471-99614315 (+)
C3H/HeJ	MGP_C3HHeJ_G0006918	lincRNA gene	Chr6:82043713-82062378 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007171	lincRNA gene	Chr6:106222531-106241314 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006402	lincRNA gene	Chr6:97401721-97419746 (+)
CAST/EiJ	MGP_CASTEiJ_G0006861	lincRNA gene	Chr6:102664866-102682750 (+)
CBA/J	MGP_CBAJ_G0006930	lincRNA gene	Chr6:110297679-110334713 (+)
DBA/2J	MGP_DBA2J_G0006952	lincRNA gene	Chr6:98753716-98771496 (+)
FVB/NJ	MGP_FVBNJ_G0006976	lincRNA gene	Chr6:97924065-97941951 (+)
LP/J	MGP_LPJ_G0007037	lincRNA gene	Chr6:103659309-103678816 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006956	lincRNA gene	Chr6:114053130-114071824 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007176	lincRNA gene	Chr6:102271152-102288977 (+)
PWK/PhJ	MGP_PWKPhJ_G0006801	lincRNA gene	Chr6:97776965-97795021 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006711	lincRNA gene	Chr6:101142958-101160852 (+)
WSB/EiJ	MGP_WSBEiJ_G0006919	lincRNA gene	Chr6:102813146-102832838 (+)

Homology

• Gene Tree
  Gm44169
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108274 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108274	Ensembl Gene Model | MGI Sequence Detail	17638	C57BL/6J
transcript	ENSMUST00000205133	Ensembl | MGI Sequence Detail	359	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;