Gm44279 Pseudogene Detail

Summary

• Symbol
  Gm44279
• Name
  predicted gene, 44279

• Feature Type
  pseudogene
• IDs
  MGI:5690671
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:107865642-107866113 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690671	pseudogene	Chr6:107865642-107866113 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013637	pseudogene	Chr6:110161424-110161912 (+)
A/J	MGP_AJ_G0013621	pseudogene	Chr6:105959647-105960135 (+)
AKR/J	MGP_AKRJ_G0013584	pseudogene	Chr6:108817786-108818274 (+)
BALB/cJ	MGP_BALBcJ_G0013601	pseudogene	Chr6:105900313-105900801 (+)
C3H/HeJ	MGP_C3HHeJ_G0013337	pseudogene	Chr6:75528876-75529364 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013985	pseudogene	Chr6:113040194-113040665 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012005	pseudogene	Chr6:103302955-103303449 (+)
CAST/EiJ	MGP_CASTEiJ_G0013139	pseudogene	Chr6:109196510-109196998 (+)
CBA/J	MGP_CBAJ_G0013419	pseudogene	Chr6:117416322-117416810 (+)
DBA/2J	MGP_DBA2J_G0013499	pseudogene	Chr6:105116908-105117396 (+)
FVB/NJ	MGP_FVBNJ_G0013499	pseudogene	Chr6:104158041-104158529 (+)
LP/J	MGP_LPJ_G0013575	pseudogene	Chr6:110231466-110231954 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013512	pseudogene	Chr6:121631062-121631533 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013977	pseudogene	Chr6:108793349-108793837 (+)
PWK/PhJ	MGP_PWKPhJ_G0012946	pseudogene	Chr6:104031565-104032054 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012729	pseudogene	Chr6:107594641-107595126 (+)
WSB/EiJ	MGP_WSBEiJ_G0013191	pseudogene	Chr6:109310485-109310973 (+)

Homology

• Gene Tree
  Gm44279
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108009 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108009	Ensembl Gene Model | MGI Sequence Detail	472	C57BL/6J
transcript	ENSMUST00000205154	Ensembl | MGI Sequence Detail	472	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;