Gm44289 Pseudogene Detail

Summary

• Symbol
  Gm44289
• Name
  predicted gene, 44289

• Feature Type
  pseudogene
• IDs
  MGI:5690681
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:66231727-66235189 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  179 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690681	pseudogene	Chr6:66231727-66235189 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013506	pseudogene	Chr6:66196960-66200434 (+)
A/J	MGP_AJ_G0013492	pseudogene	Chr6:63327314-63330823 (+)
AKR/J	MGP_AKRJ_G0013459	pseudogene	Chr6:65307311-65310773 (+)
BALB/cJ	MGP_BALBcJ_G0013471	pseudogene	Chr6:63719460-63722922 (+)
C3H/HeJ	MGP_C3HHeJ_G0013466	pseudogene	Chr6:118883195-118886657 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013856	pseudogene	Chr6:67767466-67770928 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011928	pseudogene	Chr6:60580988-60584448 (+)
CAST/EiJ	MGP_CASTEiJ_G0013024	pseudogene	Chr6:65603530-65606979 (+)
CBA/J	MGP_CBAJ_G0013288	pseudogene	Chr6:70563468-70568740 (+)
DBA/2J	MGP_DBA2J_G0013372	pseudogene	Chr6:63007159-63010621 (+)
FVB/NJ	MGP_FVBNJ_G0013371	pseudogene	Chr6:62521521-62524983 (+)
LP/J	MGP_LPJ_G0013442	pseudogene	Chr6:66102872-66106334 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013390	pseudogene	Chr6:74267370-74270832 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013854	pseudogene	Chr6:65271699-65275161 (+)
PWK/PhJ	MGP_PWKPhJ_G0012831	pseudogene	Chr6:62155237-62158841 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012615	pseudogene	Chr6:64811618-64815084 (+)
WSB/EiJ	MGP_WSBEiJ_G0013071	pseudogene	Chr6:65560866-65565945 (+)

Homology

• Gene Tree
  Gm44289
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107695 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107695	Ensembl Gene Model | MGI Sequence Detail	3463	C57BL/6J
transcript	ENSMUST00000204144	Ensembl | MGI Sequence Detail	1390	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;