Gm44506 Gene Detail

Summary

• Symbol
  Gm44506
• Name
  predicted gene 44506

• Feature Type
  lncRNA gene
• IDs
  MGI:5753082
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:55891934-55892898 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  176 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753082	lncRNA gene	Chr7:55891934-55892898 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004457	antisense lncRNA gene	Chr7:57047800-57048764 (-)
A/J	MGP_AJ_G0004436	antisense lncRNA gene	Chr7:56187890-56188854 (-)
AKR/J	MGP_AKRJ_G0004419	antisense lncRNA gene	Chr7:57497731-57498695 (-)
BALB/cJ	MGP_BALBcJ_G0004421	antisense lncRNA gene	Chr7:55805323-55806298 (-)
C3H/HeJ	MGP_C3HHeJ_G0004371	antisense lncRNA gene	Chr7:57841751-57842715 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004572	antisense lncRNA gene	Chr7:59629514-59630478 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004027	antisense lncRNA gene	Chr7:58858109-58859090 (-)
CAST/EiJ	MGP_CASTEiJ_G0004331	antisense lncRNA gene	Chr7:49051244-49052224 (-)
CBA/J	MGP_CBAJ_G0004365	antisense lncRNA gene	Chr7:61696715-61697679 (-)
DBA/2J	MGP_DBA2J_G0004379	antisense lncRNA gene	Chr7:55214486-55215461 (-)
FVB/NJ	MGP_FVBNJ_G0004397	antisense lncRNA gene	Chr7:55158001-55158965 (-)
LP/J	MGP_LPJ_G0004460	antisense lncRNA gene	Chr7:58107247-58108211 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004388	antisense lncRNA gene	Chr7:61199968-61200932 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004570	antisense lncRNA gene	Chr7:56480662-56481626 (-)
PWK/PhJ	MGP_PWKPhJ_G0004284	antisense lncRNA gene	Chr7:48464113-48465094 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004225	antisense lncRNA gene	Chr7:44524829-44525790 (-)
WSB/EiJ	MGP_WSBEiJ_G0004370	antisense lncRNA gene	Chr7:57129189-57130164 (-)

Homology

• Gene Tree
  Gm44506
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108773 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108773	Ensembl Gene Model | MGI Sequence Detail	965	C57BL/6J
transcript	ENSMUST00000206278	Ensembl | MGI Sequence Detail	965	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;