Gm44519 Pseudogene Detail

Summary

• Symbol
  Gm44519
• Name
  predicted gene 44519

• Feature Type
  pseudogene
• IDs
  MGI:5753095
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:41905719-41905840 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  147 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753095	pseudogene	Chr7:41905719-41905840 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013883	pseudogene	Chr7:42108354-42108475 (-)
A/J	MGP_AJ_G0013902	pseudogene	Chr7:41225417-41225538 (-)
AKR/J	MGP_AKRJ_G0013837	pseudogene	Chr7:42369583-42369704 (-)
BALB/cJ	MGP_BALBcJ_G0013867	pseudogene	Chr7:41484801-41484922 (-)
C3H/HeJ	MGP_C3HHeJ_G0013694	pseudogene	Chr7:43057103-43057224 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014294	pseudogene	Chr7:44203528-44203649 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010096	pseudogene	Chr16:20744594-20744715 (-)
CAST/EiJ	MGP_CASTEiJ_G0013363	pseudogene	Chr7:34403725-34403846 (-)
CBA/J	MGP_CBAJ_G0013675	pseudogene	Chr7:45548823-45548944 (-)
DBA/2J	MGP_DBA2J_G0013756	pseudogene	Chr7:41046249-41046370 (-)
FVB/NJ	MGP_FVBNJ_G0013753	pseudogene	Chr7:40789076-40789197 (-)
LP/J	MGP_LPJ_G0013828	pseudogene	Chr7:42649658-42649779 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013779	pseudogene	Chr7:44486799-44486920 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014249	pseudogene	Chr7:41662006-41662127 (-)
PWK/PhJ	MGP_PWKPhJ_G0013170	pseudogene	Chr7:34113547-34113668 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012500	pseudogene	Chr6:16669428-16669547 (+)
WSB/EiJ	MGP_WSBEiJ_G0013419	pseudogene	Chr7:42142889-42143010 (-)

Homology

• Gene Tree
  Gm44519
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108562 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108562	Ensembl Gene Model | MGI Sequence Detail	122	C57BL/6J
transcript	ENSMUST00000206486	Ensembl | MGI Sequence Detail	122	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;