Gm44523 Pseudogene Detail

Summary

• Symbol
  Gm44523
• Name
  predicted gene 44523

• Feature Type
  pseudogene
• IDs
  MGI:5753099
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:42157024-42158758 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753099	pseudogene	Chr7:42157024-42158758 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013885	pseudogene	Chr7:42416788-42418522 (-)
A/J	MGP_AJ_G0013905	pseudogene	Chr7:41485730-41487464 (-)
AKR/J	MGP_AKRJ_G0013840	pseudogene	Chr7:42650833-42652567 (-)
BALB/cJ	MGP_BALBcJ_G0013862	pseudogene	Chr7:40671799-40673533 (+)
C3H/HeJ	MGP_C3HHeJ_G0013697	pseudogene	Chr7:43324252-43325986 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014297	pseudogene	Chr7:44478621-44480355 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012153	pseudogene	Chr7:44013712-44015932 (-)
CAST/EiJ	MGP_CASTEiJ_G0013365	pseudogene	Chr7:34716446-34718168 (-)
CBA/J	MGP_CBAJ_G0013678	pseudogene	Chr7:45850036-45851770 (-)
DBA/2J	MGP_DBA2J_G0013759	pseudogene	Chr7:41329451-41331189 (-)
FVB/NJ	MGP_FVBNJ_G0013756	pseudogene	Chr7:41053882-41055616 (-)
LP/J	MGP_LPJ_G0013831	pseudogene	Chr7:42980075-42981809 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013782	pseudogene	Chr7:44853226-44854960 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014252	pseudogene	Chr7:41924377-41926111 (-)
PWK/PhJ	MGP_PWKPhJ_G0013173	pseudogene	Chr7:34432813-34434550 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012940	pseudogene	Chr7:30306436-30308172 (-)
WSB/EiJ	MGP_WSBEiJ_G0013422	pseudogene	Chr7:42483019-42484753 (-)

Homology

• Gene Tree
  Gm44523
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108491 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108491	Ensembl Gene Model | MGI Sequence Detail	1735	C57BL/6J
transcript	ENSMUST00000205616	Ensembl | MGI Sequence Detail	417	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;