Gm44526 Pseudogene Detail

Summary

• Symbol
  Gm44526
• Name
  predicted gene 44526

• Feature Type
  pseudogene
• IDs
  MGI:5753102
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:130522142-130522262 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  41 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753102	pseudogene	Chr6:130522142-130522262 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013727	pseudogene	Chr6:134353876-134353996 (-)
A/J	MGP_AJ_G0013716	pseudogene	Chr6:129154031-129154151 (-)
AKR/J	MGP_AKRJ_G0013675	pseudogene	Chr6:132722721-132722841 (-)
BALB/cJ	MGP_BALBcJ_G0013696	pseudogene	Chr6:128862460-128862580 (-)
C3H/HeJ	MGP_C3HHeJ_G0013535	pseudogene	Chr6:132972693-132972813 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014083	pseudogene	Chr6:137978117-137978237 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0013506	pseudogene	Chr6:143254076-143254196 (-)
DBA/2J	MGP_DBA2J_G0013588	pseudogene	Chr6:128044634-128044754 (-)
FVB/NJ	MGP_FVBNJ_G0013586	pseudogene	Chr6:127357199-127357319 (-)
LP/J	MGP_LPJ_G0013668	pseudogene	Chr6:134626075-134626195 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013600	pseudogene	Chr6:147724011-147724131 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014070	pseudogene	Chr6:132833706-132833826 (-)
PWK/PhJ	MGP_PWKPhJ_G0013025	pseudogene	Chr6:126848752-126848872 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0013273	pseudogene	Chr6:133245714-133245834 (-)

Homology

• Gene Tree
  Gm44526
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000107787 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107787	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00000204664	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;