Gm44579 Gene Detail

Summary

• Symbol
  Gm44579
• Name
  predicted gene 44579

• Feature Type
  protein coding gene
• IDs
  MGI:5753155
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:98083898-98118858 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic

Strain
Comparison

• SNPs within 2kb
  1298 from dbSNP Build 142
• Strain Annotations
  4

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753155	protein coding gene	Chr15:98083898-98118858 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0015225	unclassified non-coding RNA gene	Chr15:99991035-100038424 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015178	unclassified non-coding RNA gene	Chr15:111136704-111176886 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015741	unclassified non-coding RNA gene	Chr15:98975265-99010749 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm44579
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  8
• UniProt
  1

• Ensembl
  ENSMUSG00000108748 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108748	Ensembl Gene Model | MGI Sequence Detail	34961	C57BL/6J
transcript	ENSMUST00000142443	Ensembl | MGI Sequence Detail	2064	Not Applicable
polypeptide	ENSMUSP00000153744	Ensembl | MGI Sequence Detail	318	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR017452 GPCR, rhodopsin-like, 7TM
  IPR000276 G protein-coupled receptor, rhodopsin-like
  IPR000725 Olfactory receptor

References

• Summaries
  All 3
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;