Gm44613 Gene Detail

Summary

• Symbol
  Gm44613
• Name
  predicted gene 44613

• Feature Type
  lncRNA gene
• IDs
  MGI:5753189
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:17807941-17920877 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  3450 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753189	lncRNA gene	Chr7:17807941-17920877 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004410	antisense lncRNA gene	Chr7:15894138-15996348 (-)
A/J	MGP_AJ_G0004387	antisense lncRNA gene	Chr7:15571644-15686777 (-)
AKR/J	MGP_AKRJ_G0004369	antisense lncRNA gene	Chr7:15952795-16061209 (-)
BALB/cJ	MGP_BALBcJ_G0004373	antisense lncRNA gene	Chr7:15806143-15925259 (-)
C3H/HeJ	MGP_C3HHeJ_G0004322	antisense lncRNA gene	Chr7:16253710-16371080 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004522	antisense lncRNA gene	Chr7:16721670-16852164 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003980	antisense lncRNA gene	Chr7:17282618-17392111 (-)
CAST/EiJ	MGP_CASTEiJ_G0004282	antisense lncRNA gene	Chr7:12760191-12868152 (-)
CBA/J	MGP_CBAJ_G0004316	antisense lncRNA gene	Chr7:17291187-17418040 (-)
DBA/2J	MGP_DBA2J_G0004331	antisense lncRNA gene	Chr7:15487894-15599888 (-)
FVB/NJ	MGP_FVBNJ_G0004349	antisense lncRNA gene	Chr7:15458968-15568892 (-)
LP/J	MGP_LPJ_G0004411	antisense lncRNA gene	Chr7:16143247-16268020 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004340	antisense lncRNA gene	Chr7:17207008-17336558 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004521	antisense lncRNA gene	Chr7:15719385-15829065 (-)
PWK/PhJ	MGP_PWKPhJ_G0004235	antisense lncRNA gene	Chr7:12876180-12981481 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004176	antisense lncRNA gene	Chr7:10564311-10699287 (-)
WSB/EiJ	MGP_WSBEiJ_G0004321	antisense lncRNA gene	Chr7:15834278-15953241 (-)

Homology

• Gene Tree
  Gm44613
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000108545 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108545	Ensembl Gene Model | MGI Sequence Detail	112937	C57BL/6J
transcript	ENSMUST00000205637	Ensembl | MGI Sequence Detail	877	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;