Gm44629 Pseudogene Detail

Summary

• Symbol
  Gm44629
• Name
  predicted gene 44629

• Feature Type
  pseudogene
• IDs
  MGI:5753205
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:91422009-91423848 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  164 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753205	pseudogene	Chr6:91422009-91423848 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013595	pseudogene	Chr6:93040509-93042347 (-)
A/J	MGP_AJ_G0013577	pseudogene	Chr6:89497397-89499238 (-)
AKR/J	MGP_AKRJ_G0013538	pseudogene	Chr6:91982437-91984276 (-)
BALB/cJ	MGP_BALBcJ_G0013558	pseudogene	Chr6:89436589-89438430 (-)
C3H/HeJ	MGP_C3HHeJ_G0013380	pseudogene	Chr6:92460419-92462258 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013943	pseudogene	Chr6:95462131-95463970 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013098	pseudogene	Chr6:92096636-92098412 (-)
CBA/J	MGP_CBAJ_G0013377	pseudogene	Chr6:99000599-99002438 (-)
DBA/2J	MGP_DBA2J_G0013457	pseudogene	Chr6:88679539-88681377 (-)
FVB/NJ	MGP_FVBNJ_G0013456	pseudogene	Chr6:87888884-87890723 (-)
LP/J	MGP_LPJ_G0013533	pseudogene	Chr6:92995576-92997414 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013468	pseudogene	Chr6:103063139-103064978 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013934	pseudogene	Chr6:91822054-91823892 (-)
PWK/PhJ	MGP_PWKPhJ_G0012903	pseudogene	Chr6:87631927-87633766 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012684	pseudogene	Chr6:90736964-90738792 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm44629
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000108810 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108810	Ensembl Gene Model | MGI Sequence Detail	1840	C57BL/6J
transcript	ENSMUST00000206951	Ensembl | MGI Sequence Detail	1840	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;