Gm44640 Pseudogene Detail

Summary

• Symbol
  Gm44640
• Name
  predicted gene 44640

• Feature Type
  pseudogene
• IDs
  MGI:5753216
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:26847815-26848061 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753216	pseudogene	Chr7:26847815-26848061 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013853	pseudogene	Chr7:25760885-25761127 (-)
A/J	MGP_AJ_G0013854	pseudogene	Chr7:25150627-25150873 (-)
AKR/J	MGP_AKRJ_G0013801	pseudogene	Chr7:25826512-25826758 (-)
BALB/cJ	MGP_BALBcJ_G0013833	pseudogene	Chr7:25379699-25379945 (-)
C3H/HeJ	MGP_C3HHeJ_G0013657	pseudogene	Chr7:26205592-26205838 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014229	pseudogene	Chr7:26613555-26613801 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012134	pseudogene	Chr7:26396821-26397074 (-)
CAST/EiJ	MGP_CASTEiJ_G0013331	pseudogene	Chr7:19496316-19496562 (-)
CBA/J	MGP_CBAJ_G0013639	pseudogene	Chr7:27781162-27781408 (-)
DBA/2J	MGP_DBA2J_G0013718	pseudogene	Chr7:24962645-24962891 (-)
FVB/NJ	MGP_FVBNJ_G0013711	pseudogene	Chr7:25043290-25043536 (-)
LP/J	MGP_LPJ_G0013794	pseudogene	Chr7:26091813-26092055 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013731	pseudogene	Chr7:27397319-27397575 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014211	pseudogene	Chr7:25356842-25357088 (-)
PWK/PhJ	MGP_PWKPhJ_G0013143	pseudogene	Chr7:19989063-19989423 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012918	pseudogene	Chr7:16345128-16345392 (-)
WSB/EiJ	MGP_WSBEiJ_G0013392	pseudogene	Chr7:25644321-25644563 (-)

Homology

• Gene Tree
  Gm44640
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108306 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108306	Ensembl Gene Model | MGI Sequence Detail	247	C57BL/6J
transcript	ENSMUST00000206894	Ensembl | MGI Sequence Detail	247	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;