Gm44720 Pseudogene Detail

Summary

• Symbol
  Gm44720
• Name
  predicted gene 44720

• Feature Type
  pseudogene
• IDs
  MGI:5753296
  NCBI Gene: 115486525
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:63476726-63476929 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  170 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753296	pseudogene	Chr7:63476726-63476985 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013920	pseudogene	Chr7:64932179-64932439 (+)
A/J	MGP_AJ_G0013939	pseudogene	Chr7:63701021-63701280 (+)
AKR/J	MGP_AKRJ_G0013873	pseudogene	Chr7:65043780-65044040 (+)
BALB/cJ	MGP_BALBcJ_G0013895	pseudogene	Chr7:63438490-63438749 (+)
C3H/HeJ	MGP_C3HHeJ_G0013730	pseudogene	Chr7:65682691-65682951 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014329	pseudogene	Chr7:67719204-67719463 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012180	pseudogene	Chr7:66659245-66659504 (+)
CAST/EiJ	MGP_CASTEiJ_G0013391	pseudogene	Chr7:56350444-56350703 (+)
CBA/J	MGP_CBAJ_G0013711	pseudogene	Chr7:69903921-69904181 (+)
DBA/2J	MGP_DBA2J_G0013789	pseudogene	Chr7:62434280-62434539 (+)
FVB/NJ	MGP_FVBNJ_G0013790	pseudogene	Chr7:62535792-62536051 (+)
LP/J	MGP_LPJ_G0013864	pseudogene	Chr7:66162541-66162800 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013816	pseudogene	Chr7:70213671-70213931 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014288	pseudogene	Chr7:64304724-64304984 (+)
PWK/PhJ	MGP_PWKPhJ_G0013203	pseudogene	Chr7:55446483-55446742 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012969	pseudogene	Chr7:51444037-51444296 (+)
WSB/EiJ	MGP_WSBEiJ_G0013453	pseudogene	Chr7:64692138-64692398 (+)

Homology

• Gene Tree
  Gm44720
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  2
• Targeted
  2
• Genomic Mutations
  2 involving Gm44720
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000108629 (Evidence)
• NCBI Gene
  115486525

Representative Sequences			Length	Strain/Species
genomic	115486525	NCBI Gene Model | MGI Sequence Detail	204	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;