Gm44727 Pseudogene Detail

Summary

• Symbol
  Gm44727
• Name
  predicted gene 44727

• Feature Type
  pseudogene
• IDs
  MGI:5753303
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:132315821-132316271 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753303	pseudogene	Chr6:132315821-132316271 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013736	pseudogene	Chr6:136067736-136068186 (-)
A/J	MGP_AJ_G0013726	pseudogene	Chr6:130746530-130746980 (-)
AKR/J	MGP_AKRJ_G0013682	pseudogene	Chr6:134447965-134448415 (+)
BALB/cJ	MGP_BALBcJ_G0013707	pseudogene	Chr6:130433176-130433626 (-)
C3H/HeJ	MGP_C3HHeJ_G0013542	pseudogene	Chr6:134719781-134720231 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014101	pseudogene	Chr6:140045545-140045995 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0013513	pseudogene	Chr6:145051438-145051888 (-)
DBA/2J	MGP_DBA2J_G0013597	pseudogene	Chr6:129641192-129641642 (-)
FVB/NJ	MGP_FVBNJ_G0013593	pseudogene	Chr6:128568327-128568777 (-)
LP/J	MGP_LPJ_G0013677	pseudogene	Chr6:136359934-136360384 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013607	pseudogene	Chr6:148940882-148941332 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014081	pseudogene	Chr6:134543939-134544387 (-)
PWK/PhJ	MGP_PWKPhJ_G0013036	pseudogene	Chr6:128137556-128138006 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012816	pseudogene	Chr6:133375276-133375726 (-)
WSB/EiJ	MGP_WSBEiJ_G0013281	pseudogene	Chr6:135041635-135042085 (-)

Homology

• Gene Tree
  Gm44727
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000107626 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107626	Ensembl Gene Model | MGI Sequence Detail	451	C57BL/6J
transcript	ENSMUST00000204225	Ensembl | MGI Sequence Detail	451	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;